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The National Genomic Test Directories specify which genomic tests are commissioned by the NHS in England, to be delivered by Genomic Laboratory Hubs.

Clinical Indication ID & Name

R212

Peutz Jeghers Syndrome

Test Group

Inherited cancer

Test code

R212.1

Test name

N/A

Target genes

STK11

Test scope

n/a

Test method/ technology

Single gene sequencing >=10 amplicons

Optimal Family Structure

n/a

Eligibility Criteria

Living affected individual (proband) where the individual +/- family history meets one of the criteria.
1. ≥2 PJS-type hamartomatous polyps, OR
2. ≥1 PJS-type hamartomatous polyp and characteristic mucocutaneous pigmentation, OR
3. Characteristic mucocutaneous pigmentation age <10, OR 4. Sex cord tumours with annular tubules (SCAT) at any age 5. Adenoma malignum of the cervix at any age 6. ≥1 PJS-type hamartomatous polyp, AND ≥1 first / second degree relative with: a. ≥1 PJS-like feature, OR b. ≥2 PJS-related cancers (the two cancers can be in the same or different relatives), OR 7. Characteristic mucocutaneous pigmentation, AND ≥1 first / second degree relative with: a≥1 PJS-like feature, OR b. ≥2 PJS-related cancers (the two cancers can be in the same or different relatives) Deceased affected individual (proband) where all the following are met; (i) the individual +/- family history meets one of the above criteria, AND (ii) a previously stored constitutional blood/DNA or tissue sample (tumour or normal) is available, AND (iii) no living affected individual is available for genetic testing, AND (iv) after discussion at specialist cancer genetics MDT PJS-like features: characteristic mucocutaneous pigmentation, PJS-type hamartomatous polyps PJS-related cancers: epithelial colorectal, gastric, pancreatic, breast, and ovarian cancers, sex cord tumors with annular tubules (SCTAT), adenoma malignum of the cervix, and Sertoli cell tumors (LCST) of the testes NOTE: The majority of polyps should be histologically confirmed Genetic testing may occasionally be appropriate outside these criteria following discussion at a specialist MDT with a cancer geneticist present Referrals for testing will be triaged by the Genomic Laboratory; testing should be targeted at those where a genetic or genomic diagnosis will guide management for the proband or family.

Test code

R212.2

Test name

N/A

Target genes

STK11

Test scope

n/a

Test method/ technology

MLPA or equivalent

Optimal Family Structure

n/a

Eligibility Criteria

Living affected individual (proband) where the individual +/- family history meets one of the criteria.
1. ≥2 PJS-type hamartomatous polyps, OR
2. ≥1 PJS-type hamartomatous polyp and characteristic mucocutaneous pigmentation, OR
3. Characteristic mucocutaneous pigmentation age <10, OR 4. Sex cord tumours with annular tubules (SCAT) at any age 5. Adenoma malignum of the cervix at any age 6. ≥1 PJS-type hamartomatous polyp, AND ≥1 first / second degree relative with: a. ≥1 PJS-like feature, OR b. ≥2 PJS-related cancers (the two cancers can be in the same or different relatives), OR 7. Characteristic mucocutaneous pigmentation, AND ≥1 first / second degree relative with: a≥1 PJS-like feature, OR b. ≥2 PJS-related cancers (the two cancers can be in the same or different relatives) Deceased affected individual (proband) where all the following are met; (i) the individual +/- family history meets one of the above criteria, AND (ii) a previously stored constitutional blood/DNA or tissue sample (tumour or normal) is available, AND (iii) no living affected individual is available for genetic testing, AND (iv) after discussion at specialist cancer genetics MDT PJS-like features: characteristic mucocutaneous pigmentation, PJS-type hamartomatous polyps PJS-related cancers: epithelial colorectal, gastric, pancreatic, breast, and ovarian cancers, sex cord tumors with annular tubules (SCTAT), adenoma malignum of the cervix, and Sertoli cell tumors (LCST) of the testes NOTE: The majority of polyps should be histologically confirmed Genetic testing may occasionally be appropriate outside these criteria following discussion at a specialist MDT with a cancer geneticist present Referrals for testing will be triaged by the Genomic Laboratory; testing should be targeted at those where a genetic or genomic diagnosis will guide management for the proband or family.

Commissioning group

Specialised

Overlapping idications

n/a

Address for samples/request forms

Genetics Laboratory
5th Floor Tower Wing
Guy’s Hospital
London
SE1 9RT

Contact with queries

gst-tr.southeastglh@nhs.net

Supporting documents

n/a

Education resources

n/a

Turn around times

All our turnaround times are listed on our specific turn around page https://southeastgenomics.nhs.uk/professionals/service-turn-around-times/

Consent record

See consent guidance in test request form

Sample requirements

Sample Requirements Each sample must be sent labelled with 3 patient identifiers and must state the sample type clearly on the sample container. Sample Rejection Samples may be rejected for the following reasons: 1. Samples and request form do not show at least three identical patient identifiers 2. The sample is in the incorrect collection media 3. The request form is not sufficiently completed 4. The sample is not of sufficient volume 5. The sample is too old