Order or find a test

The National Genomic Test Directories specify which genomic tests are commissioned by the NHS in England, to be delivered by Genomic Laboratory Hubs.

Clinical Indication ID & Name

M180

Xp11.2 Translocation-Associated Renal Cell Carcinoma - Paediatric

Test Group

Paediatric

Specialties

Test code

M180.1

Test name

Multi-target NGS panel - small variant (TFE3)

Target genes

TFE3

Test scope

Small variant detection

Test method/ technology

Panel

Optimal Family Structure

n/a

Eligibility Criteria

Specialist paediatric pathology review indicates that molecular assessment will aid diagnosis or management

Test code

M180.2

Test name

TFE3 seq

Target genes

TFE3

Test scope

Small variant detection

Test method/ technology

Single gene sequencing

Optimal Family Structure

n/a

Eligibility Criteria

Specialist paediatric pathology review indicates that molecular assessment will aid diagnosis or management

Test code

M180.3

Test name

TFE3-ASPSCR1 FISH/RT-PCR

Target genes

TFE3-ASPSCR1

Test scope

Structural variant detection

Test method/ technology

FISH/Simple targeted mutation testing

Optimal Family Structure

n/a

Eligibility Criteria

Specialist paediatric pathology review indicates that molecular assessment will aid diagnosis or management

Test code

M180.4

Test name

TFE3-MITF FISH/RT-PCR

Target genes

TFE3-MITF

Test scope

Structural variant detection

Test method/ technology

FISH/Simple targeted mutation testing

Optimal Family Structure

n/a

Eligibility Criteria

Specialist paediatric pathology review indicates that molecular assessment will aid diagnosis or management

Test code

M180.5

Test name

TFE3-PRCC FISH/RT-PCR

Target genes

TFE3-PRCC

Test scope

Structural variant detection

Test method/ technology

FISH/Simple targeted mutation testing

Optimal Family Structure

n/a

Eligibility Criteria

Specialist paediatric pathology review indicates that molecular assessment will aid diagnosis or management

Test code

M180.6

Test name

WGS Germline and Tumour

Target genes

All including burden / signature

Test scope

All variant types

Test method/ technology

WGS

Optimal Family Structure

n/a

Eligibility Criteria

Specialist paediatric pathology review indicates that molecular assessment will aid diagnosis or management

Test code

M180.7

Test name

Multi-target NGS panel - structural variant (TFE3-ASPSCR1, TFE3-MITF, TFE3-PRCC, NTRK1, NTRK2, NTRK3)

Target genes

TFE3-ASPSCR1, TFE3-MITF, TFE3-PRCC, NTRK1, NTRK2, NTRK3

Test scope

Structural variant detection

Test method/ technology

Panel

Optimal Family Structure

n/a

Eligibility Criteria

Specialist paediatric pathology review indicates that molecular assessment will aid diagnosis or management / Patient’s clinical status means they are eligible for an NTRK inhibitor in the event an NTRK rearrangement is detected

Commissioning group

n/a

Overlapping idications

n/a

Address for samples/request forms

Dept of Clinical Neuropathology
King’s College Hospital
 Denmark Hill
London
SE5 9RS

Contact with queries

kch-tr.molecularneuropathology@nhs.net

Supporting documents

n/a

Education resources

n/a

Turn around times

All our turnaround times are listed on our specific turn around page https://southeastgenomics.nhs.uk/professionals/service-turn-around-times/

Request form download

Neurological Cancer Order Form Record of Discussion Form

Consent record

See consent guidance in test request form

Sample requirements

Samples may be rejected for the following reasons: 1.Samples and request form do not show at least three identical patient identifiers 2.The sample is in the incorrect collection media 3.The request form is not sufficiently completed 4.The sample is not of sufficient volume 5.The sample is too old